Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891197.1_cds_XP_016445934.1_40842
CDS Infomation

[gene=LOC107771123] [db_xref=GeneID:107771123] [protein=3-ketoacyl-CoA synthase 20-like] [protein_id=XP_016445934.1] [location=complement(join(6429..7193,7720..8433))] [gbkey=CDS]
Sequence

ATGGCAGAAAATTCTCGGAATGGAGAAATCCATTCAAATCTACCCAATTTTCTTCTTTCT
GTTAGACTTAAATATGTAAAACTTGGATACCATTACCTAATATCAAATGCAATTTATCTT
CTCATTGTTCCAATTCTTGTTGCTATTGGACTTCATCTTTCAACTCTTACACTTGAAGAT
CTCATTACAAATCTAGCAATGTTGAAATCTTATTCAACACTTGTTGTTTTTTTAGCCACA
TTATATTTCATGAGTCGTCCAAGAAATGTTTACTTAATTGATTTTGCATGTTACAAACCA
CATGAACGTTATATGATATCTAAAGAACGTTTAGTAGAGAAATTAGCAGGCATTTTTGAT
GAAGATAGTTTGAATTTTCAAAAGAAAATATTGGAAAGGTCAGGTTTAAGTGATAAGACT
TATATACCAGTAGATAAATGGATTCCATCAAATTTTTCCCTTAGTAGTAACCAACATCAA
GCTAAATTGGTTATTGTTGGTGCCATTGACAATCTGTTGGCGAAAACAGGAGTGAAAATC
CGAGAGATTGGGATTGTTATTGTTAATTCTAGTATGTTTAATCCAACACCTTCTCTTTCT
GCTATGATTGTCAACCATTATAAGCTTGGAGTTAATGTGATTACCTATAATCTTGGAGGC
ATGGGTTGTAGTGCTGGACTTATTTCTGTGGACCTAGCTAATCGGCTTTTACAGGGGCAA
GCAAACACCTATGCACTTATAGTAAGCACGGAAGTAGTCTCAGCGGCCTTCTACACGGGG
AAAGACAAATCAAAGCTAATACCAAATATGATTTTCCGGATGGGTGCATCTGCTATTCTC
CTTTCGAACCGTTTCTCGGATCGTTGGCGCTCAAAATATCAACTGATGCACGTTGTCCGC
ACCCATAAAGGTGCAGACGACAGAGCATTCGGTTGCGTCTACCAAGATGAGGAAGAGGAT
GGGAAAAAAGGCATGTCATTGTCAAAAGACTTAATGGCAGTAGCTGGTGAGGCCTTAAAA
ACAAATATTACAACTTTGGGCCCTCTAGTCCTCCCAATGTCCGAGCAGCTCCTCTTTTTC
GCCTCTTTAGTCGCGAGAAATGTCTTTAAAAGGAAAATAAAACCATATATCCCTGATTTC
AAGATGGCGTTCGAGCATTTTTGCATTCATGCAGGAGGGAGGGCCGTGTTGGACGAACTT
CAGAAGAATCTTGATCTCTCAGAAGTACTTATGGAACCTTCTAGAATGACACTTTATAGG
TTCGGAAACACTTCAAGTAGCTCAGTGTGGTATAATTTGGCCTATTCCGAGGCCAAAGGG
AGGATAAAGAAGGGTGACAGAGCATGGCAAATAGGTTTTGGCTCAGGATTCAAATGTAAC
AGTGCTGTTTGGCGCGCGCTAAGGAATGTTGATGCAGCCACTGAAAAGAACGCGTGGACG
GATGAGATTGAGGATTTCCCTGTTCAAATCCCATGTTGA

Peptide Sequence

PEP ID

XP_016445934.1
PEP Infomation

PREDICTED: 3-ketoacyl-CoA synthase 20-like [Nicotiana tabacum]
Sequence

MAENSRNGEIHSNLPNFLLSVRLKYVKLGYHYLISNAIYLLIVPILVAIGLHLSTLTLED
LITNLAMLKSYSTLVVFLATLYFMSRPRNVYLIDFACYKPHERYMISKERLVEKLAGIFD
EDSLNFQKKILERSGLSDKTYIPVDKWIPSNFSLSSNQHQAKLVIVGAIDNLLAKTGVKI
REIGIVIVNSSMFNPTPSLSAMIVNHYKLGVNVITYNLGGMGCSAGLISVDLANRLLQGQ
ANTYALIVSTEVVSAAFYTGKDKSKLIPNMIFRMGASAILLSNRFSDRWRSKYQLMHVVR
THKGADDRAFGCVYQDEEEDGKKGMSLSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFF
ASLVARNVFKRKIKPYIPDFKMAFEHFCIHAGGRAVLDELQKNLDLSEVLMEPSRMTLYR
FGNTSSSSVWYNLAYSEAKGRIKKGDRAWQIGFGSGFKCNSAVWRALRNVDAATEKNAWT
DEIEDFPVQIPC

Transcript Sequence

Gene sequence data has not been registered.